Supported data types
Data type
Accepted data format
File formats
Cell coordinates
Point, Points
numpy array
.npy, .h5
Neuron morphology
Mesh, morphapi.Neuron
Image (3D)
Volume, Actor
numpy array
.npy, .tiff
pandas DataFrame
.json, .h5
Accepted data format: the Actor classes for the data type expect the data in specific formats, this column illustrates what they expect.
File formats: example file formats that data can be stored in. When bold it means that the class can load the data from files directly. Check out Using your data to see how to load data and process it for brainrender.
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